Sex-Linked & Pedigrees

Sex-Linked & Pedigrees

6 min read Updated Mar 26, 2026

Humans have 22 pairs of autosomes (non-sex chromosomes) and one pair of sex chromosomes. Females are XX. Males are XY. This unequal setup creates unique inheritance patterns for genes on the X and Y chromosomes.

Sex Determination

The SRY gene on the Y chromosome is the master switch for male development. It triggers testis formation, which leads to testosterone production and male sex characteristics. Without SRY, the default developmental pathway is female.

X-Linked Recessive Inheritance

The X chromosome carries hundreds of genes. Males have only one X, so they express whatever allele is on it - they are hemizygous for X-linked genes. Females have two X chromosomes, so they can be carriers (heterozygous) without showing symptoms.

Key features of X-linked recessive traits:

  • Affected individuals are almost always male (one bad copy is enough)
  • Carrier females (XAX^{A} XaX^{a}) are usually unaffected but can pass the allele to sons
  • Affected fathers cannot pass the trait to sons (fathers give Y to sons, not X)
  • All daughters of an affected father are at least carriers (they inherit his X)

Classic examples: hemophilia A, red-green color blindness, Duchenne muscular dystrophy.

X-Linked Dominant Inheritance

X-linked dominant traits are expressed in both males AND females who carry even one copy. However, because females have two X chromosomes and X-inactivation occurs randomly, affected females may show milder or more variable symptoms than affected males.

Key features:

  • Affected fathers pass the trait to ALL daughters (they all get his X) but NO sons (they get Y)
  • Affected mothers pass the trait to approximately half of all children regardless of sex
  • Both males and females are affected, but females may show variable expressivity

Y-Linked Inheritance

The Y chromosome is small and carries very few genes (about 50-60 protein-coding genes). Y-linked traits pass exclusively from father to son.

The most important Y-linked gene is SRY (sex-determining region Y). Y-linked traits are rare and always appear in all male descendants of an affected father.

X-Inactivation and Barr Bodies

Females have twice as many X-linked genes as males. To balance gene dosage, each female cell randomly inactivates one X chromosome early in embryonic development. The inactivated X condenses into a Barr body - a dark, inactive clump visible at the edge of the nucleus.

This process is random: in some cells the maternal X is active, in others the paternal X is active. The result is a mosaic of two cell populations.

The classic example is the calico cat. Coat color is X-linked, with one allele for orange and one for black. A heterozygous female (XOX^{O} XBX^{B}) randomly inactivates one X in each patch of skin, producing a patchwork of orange and black fur. Male cats (XY) can only be orange or black, never calico.

Pedigree Analysis

A pedigree is a family tree that tracks a trait across generations. The MCAT expects you to look at a pedigree and determine the most likely inheritance pattern.

Pedigree symbols:

  • Circles = female, Squares = male
  • Filled = affected, Open = unaffected
  • Half-filled = carrier (for recessive traits)
  • Horizontal line = mating pair
  • Vertical line = parent-to-offspring connection
Pedigree chart showing autosomal recessive inheritance pattern with carrier parents and affected offspring across multiple generations
A pedigree showing autosomal recessive inheritance. Squares are males, circles are females. Filled symbols indicate affected individuals. Credit: OpenStax Biology 2e, CC BY 4.0

How to Read a Pedigree

Use this decision tree:

Step 1: Is it dominant or recessive?

  • If two unaffected parents have an affected child, the trait is recessive (both parents must be carriers)
  • If every affected individual has at least one affected parent, the trait is likely dominant

Step 2: Is it autosomal or X-linked?

  • If affected fathers have affected sons, it is NOT X-linked (must be autosomal)
  • If the trait appears much more frequently in males, consider X-linked recessive
  • If an affected father passes the trait to ALL daughters, consider X-linked dominant

Quick Reference: Inheritance Pattern Clues

PatternKey Clues
Autosomal DominantAffected in every generation; affected individual has at least one affected parent; males and females equally affected
Autosomal RecessiveCan skip generations; unaffected parents can have affected children; males and females equally affected
X-linked RecessiveMore males affected; carrier mothers pass to sons; affected fathers have carrier daughters but unaffected sons
X-linked DominantAffected fathers pass to ALL daughters but NO sons; affected mothers pass to ~50% of children
MitochondrialMaternal inheritance only; affected mother passes to all children; affected father passes to none
A color-blind man (XbX^{b} Y) has children with a carrier woman (XBX^{B} XbX^{b}). What fraction of their sons will be color blind?
Click to reveal answer
12\frac{1}{2}. Sons get Y from the father and X from the mother. The mother is XBX^{B} XbX^{b}, so half her X gametes carry XbX^{b}. Half the sons will be XbX^{b} Y (color blind) and half will be XBX^{B} Y (normal vision).
In a pedigree, two unaffected parents have an affected daughter. What inheritance patterns are possible?
Click to reveal answer
Autosomal recessive. Both parents must be carriers (Aa x Aa) to produce an affected daughter (aa). X-linked recessive is ruled out because the daughter is affected - she would need two copies of the recessive allele, meaning the father would also need to be affected (XaX^{a} Y). Since the father is unaffected, this cannot be X-linked recessive.